Education Graduate School Polish Academy of Science - Poland , Theoretical Physics Graduate School University of Chicago (1989) Honors & Awards Winner Mathematics Olympiad Poland (1971)

Research Interest Crystallography Protein Folding

Rezacova, P., Borek, D., Moy, S.F., Joachimiak, A., Otwinowski, Z. (2008) Crystal structure and putative function of small Toprim domain-containing protein from Bacillus stearothermophilus. Link Proteins 70: 311-9 Kudlicki, A., Rowicka, M., Otwinowski, Z. (2007) The crystallographic fast Fourier transform. Recursive symmetry reduction. Acta Crystallogr. A 63: 465-80 Machius, M., Brautigam, C.A., Tomchick, D.R., Ward, P., Otwinowski, Z., Blevins, J.S., Deka, R.K., Norgard, M.V. (2007) Structural and biochemical basis for polyamine binding to the Tp0655 lipoprotein of Treponema pallidum: putative role for Tp0655 (TpPotD) as a polyamine receptor. J. Mol. Biol. 373: 681-94 Link Rowicka, M., Kudlicki, A., Tu, B.P., Otwinowski, Z. (2007) High-resolution timing of cell cycle-regulated gene expression. Proc. Natl. Acad. Sci. U.S.A. 104: 16892-7 Link Rezacova, P., Krejcirikova, V., Borek, D., Moy, S.F., Joachimiak, A., Otwinowski, Z. (2007) The crystal structure of the effector-binding domain of the trehalose repressor TreR from Bacillus subtilis 168 reveals a unique quarternary assembly. Proteins 69: 679-82 Link Grabowski, M., Joachimiak, A., Otwinowski, Z., Minor, W. (2007) Structural genomics: keeping up with expanding knowledge of the protein universe. Curr. Opin. Struct. Biol. 17: 347-53 Link Kudlicki, A., Rowicka, M., Otwinowski, Z. (2007) SCEPTRANS: an online tool for analyzing periodic transcription in yeast. Bioinformatics 23: 1559-61 Link Borek, D., Ginell, S.L., Cymborowski, M., Minor, W., Otwinowski, Z. (2007) The many faces of radiation-induced changes. J. Synchrotron. Radiat. 14: 24-33 pdf Yang, M. Gocke, C.B., Luo, X., Borek, D., Tomchick, D.R., Machius, M., Otwinowski, Z, Yu H. (2006) Structural basis for CoREST-dependent demethylation of nucleosomes by the human LSD1 histone demethylase. Mol. Cell. 23: 377-87 Link Minor, W., Cymborowski, M., Otwinowski, Z., Chruszcz, M. (2006) HKL-3000: the integration of data reduction and structure solution-from diffraction images to an initial model in minutes. Acta Crystallogr. D 62: 859-66 pdf Tu, B.P., Kudlicki, A. Rowicka, M., McKnight, S.L. (2005) Logic of the Yeast Metabolic Cycle: Temporal compartmentalization of Cellular Processes. Science 310: 1152 Link Kudlicki, A., Rowicka, M., Gilski, M., Otwinowski, Z. (2005) An efficient routine for computing symmetric real spherical harmonics for high orders of expansion. Journal of Applied Crystallography 38: 501 pdf Pertsemlidis, A., Zelinka, J., Fondon, J.W. 3rd, Henderson, R.K., Otwinowski, Z. (2005) Bayesian statistical studies of the Ramachandran distribution. Stat. Appl. Genet. Mol. Biol. 4: Article 35 Link Stefankova, P., Maderova, J., Barak, I., Kollarova, M., Otwinowski, Z. (2005) Expression, purification and X-ray crystallographic analysis of thioredoxin from Streptomyces coelicolor. Acta Crystallogr. F 61: 164-8 Link Cigler, P., Kozisek, M., Rezacova, P., Brynda, J., Otwinowski, Z., Pokorna, J., Plesek, J., Gruner, B., Doleckova-Maresova, L., Masa, M., Sedlacek, J., Bodem, J., Krausslich, H.G., Kral, V., Konvalinka, J. (2005) From nonpeptide toward noncarbon protease inhibitors: metallacarboranes as specific and potent inhibitors of HIV protease. Proc. Natl. Acad. Sci. U.S.A. 102: 15394-9 Link Kudlicki, A., Rowicka, M., Otwinowski, Z.(2004) Stereochemical Rules for Connecting Disjoint Protein Fragments. AIP Conference Proceedings 735, 169 pdf Rowicka, M, Kudlicki, A, Zelinka, J, Otwinowski, Z. (2004) Coordinate transformations in modern crystallographic computing. Acta Crystallogr. A 60: 542-9 pdf O'Toole, N., Grabowski, M., Otwinowski, Z., Minor, W., Cygler, M. (2004) The structural genomics experimental pipeline: insights from global target lists. Proteins 56: 201-10 Link Kudlicki, A., Rowicka, M., Otwinowski, Z. (2004) The crystallographic fast Fourier transform. IV. FFT-asymmetric units in the reciprocal space. Acta Crystallogr. A 60: 146-52 pdf Rowicka, M., Otwinowski, Z. (2003) Application of Maximum Entropy principle to modeling torsion angle probalbilty distribution in proteins.

AIP Conference Proceedings 707: 359-70 pdf