Computational, Comparative and Functional Genomics

Yan Fu, Oliver Bannach, Hao Chen, Jan-Hendrik Teune, Axel Schmitz, Gerhard Steger, Liming Xiong, and W. Brad Barbazuk . Alternative Splicing of Anciently Exonized 5S rRNA Regulates Plant Transcription Factor TFIIIA. Genome Research 2009 19:913-21. W. Brad Barbazuk, Yan Fu, Karen M. McGinnis. Genome-wide analyses of alternative splicing in plants: Opportunities and Challenges. Genome Research 2008 18:1381-92. Subramanian S, Fu Y, Sunkar R, Barbazuk BW, Zhu JK, Yu O. Novel and nodulation-regulated microRNAs in soybean roots. BMC Genomics. 2008 9:160 W. Brad Barbazuk, Scott J. Emrich*, Hsin D. Chen, Li Li, and Patrick S. Schnable. SNP discovery in maize via 454 transcriptome sequencing.Plant J. 2007 51:910-18 Scott J. Emrich, W. Brad Barbazuk, Li Li and Patrick S. Schnable. Gene discovery and annotation using LCM-454 transcriptome sequencing. Genome Research 2007 17:69-73. Epub 2006 Nov 9. Barbazuk, W. B, Bedell, J. A and Pablo D. Rabinowicz. Reduced representation sequencing: a success in maize and a promise for other plant genomes.BioEssays 2005; 27:839-848