教育经历 2002.92006.12 中国科学技术大学细胞生物学博士学位研究生(博士)毕业 2000.92003.7 中国科学技术大学计算机科学与技术学士学位双学士学位 1998.92002.7 中国科学技术大学高分子科学与工程学士学位本科(学士) 工作经历 2009.7至今 华中科技大学生命科学与技术学院教授 2007.72009.7 中国科学技术大学生命科学学院系统生物学系副教授 2007.12007.7 中国科学技术大学生命科学学院研究助理

生物信息学、蛋白质科学、细胞自噬、磷酸化、深度学习

Wang C, Shui K, Ma S, Lin S, Zhang Y, Wen B, Deng W, Xu H, Hu H, Guo A, Xue Y#, Zhang L#.Integrated omics in Drosophila uncover a circadian kinome. Ruan C, Wang C, Gong X, Zhang Y, Deng W, Zhou J, Huang D, Wang Z, Zhang Q, Guo A, Lu J, Gao J#, Peng D#, Xue Y#.An integrative multi-omics approach uncovers the regulatory role of CDK7 and CDK4 in autophagy activation induced by silica nanoparticles. Deng W, Ma L, Zhang Y, Zhou J, Wang Y, Liu Z, Xue Y#.THANATOS: an integrative data resource of proteins and post-translational modifications in the regulation of autophagy. Guo Y, Peng D, Zhou J, Lin S, Wang C, Ning W, Xu H, Deng W#, Xue Y#.iEKPD 2.0: an update with rich annotations for eukaryotic protein kinases, protein phosphatases and proteins containing phosphoprotein-binding domains. Ning W, Guo Y, Lin S, Mei B, Wu Y, Jiang P, Tan X, Zhang W, Chen G, Peng D, Chu L#, Xue Y#.DrLLPS: a data resource of liquid-liquid phase separation in eukaryotes. Zhang Y, Xie Y, Liu W, Deng W, Peng D, Wang C, Xu H, Ruan C, Deng Y, Guo Y, Lu C, Yi C, Ren J#, Xue Y#.DeepPhagy: a deep learning framework for quantitatively measuring autophagy activity in Saccharomyces cerevisiae. Lin S, Wang C, Zhou J, Shi Y, Ruan C, Tu Y, Yao L, Peng D, Xue Y#.EPSD: a well-annotated data resource of protein phosphorylation sites in eukaryotes. Ning W, Lin S, Zhou J, Guo Y, Zhang Y, Peng D, Deng W#, Xue Y#.WocEA: The visualization of functional enrichment results in word clouds. Zhou J, Xu Y, Lin S, Guo Y, Deng W, Zhang Y, Guo A, Xue Y#.iUUCD 2.0: an update with rich annotations for ubiquitin and ubiquitin-like conjugations. Xu Y, Zhang S, Lin S, Guo Y, Deng W, Zhang Y, Xue Y#.WERAM: a database of writers, erasers and readers of histone acetylation and methylation in eukaryotes.